Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_01580 | Not Available | Positive | 1492657 - 1492980 | 11817.3 |
| conjugative transfer protein | KARP_01581 | Not Available | Positive | 1492980 - 1493375 | 15437.3 |
| conjugative transfer protein | KARP_01582 | Not Available | Positive | 1493379 - 1493531 | 5761.11 |
| uncharacterised protein | KARP_01583 | Not Available | Positive | 1493528 - 1493914 | 14548.8 |
| uncharacterised protein | KARP_01584 | Not Available | Positive | 1494147 - 1494473 | 11828.8 |
| conjugal transfer protein | KARP_01585 | Not Available | Positive | 1494516 - 1495406 | 33635.6 |
| conjugal transfer protein | KARP_01586 | P41067 | Positive | 1495375 - 1495848 | 17117.6 |
| uncharacterised protein | KARP_01587 | Not Available | Positive | 1495848 - 1496177 | 12588.8 |
| conjugal transfer protein trac | KARP_01588 | Not Available | Positive | 1496158 - 1497030 | 33368.5 |
| conjugal transfer protein trac | KARP_01589 | P18004 | Positive | 1497002 - 1497913 | 33079.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
