Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | KARP_01500 | P58245 | Positive | 1411187 - 1412191 | 38374.4 |
| conjugal transfer protein | KARP_01501 | P09130 | Negative | 1412201 - 1413187 | 36808.3 |
| is5 family transposase isot6 | KARP_01502 | Q00462 | Positive | 1413264 - 1413701 | 17072.9 |
| is5 family transposase isot6 | KARP_01503 | Q00462 | Positive | 1413713 - 1413940 | 8776.8 |
| is5 family transposase isot6 | KARP_01504 | Q00462 | Positive | 1413918 - 1414088 | 6715.45 |
| conjugal transfer protein | KARP_01505 | P09130 | Negative | 1414105 - 1414359 | 9381.64 |
| conjugal transfer protein trad | KARP_01506 | Not Available | Negative | 1414361 - 1414690 | 12865.9 |
| conjugal transfer protein trah | KARP_01507 | Not Available | Negative | 1414671 - 1415069 | 14840.4 |
| conjugal transfer protein trah | KARP_01508 | P15069 | Negative | 1415119 - 1415748 | 22955.5 |
| conjugal transfer protein | KARP_01509 | Not Available | Negative | 1415745 - 1416491 | 28530.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
