Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_01440 | Not Available | Negative | 1351797 - 1351931 | 5141.41 |
| conjugal transfer protein trag | KARP_01441 | P33790 | Negative | 1351918 - 1353813 | 69764.3 |
| conjugal transfer protein trah | KARP_01442 | Not Available | Negative | 1353813 - 1354268 | 17458.8 |
| conjugal transfer protein trah | KARP_01443 | P15069 | Negative | 1354222 - 1355115 | 32652.0 |
| conjugal transfer protein | KARP_01444 | Not Available | Negative | 1355537 - 1356070 | 20663.3 |
| ankyrin repeat-containing protein 16 | KARP_01445 | Q5UQV3 | Negative | 1356186 - 1357772 | 59666.7 |
| conjugal transfer protein tran | KARP_01446 | Not Available | Negative | 1357840 - 1357953 | 4349.32 |
| conjugal transfer protein tran | KARP_01447 | Not Available | Negative | 1358221 - 1359534 | 50026.9 |
| type-f conjugative transfer system pilin assembly protein trbc | KARP_01448 | P18473 | Negative | 1359531 - 1359914 | 14430.8 |
| conjugal transfer protein | KARP_01449 | P18471 | Negative | 1359937 - 1360881 | 34604.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
