Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_01330 | Not Available | Negative | 1250993 - 1251796 | 30776.5 |
| uncharacterised protein | KARP_01331 | Not Available | Negative | 1251877 - 1252266 | 14470.8 |
| atp-binding protein | KARP_01332 | Not Available | Negative | 1252533 - 1252808 | 10084.2 |
| atp-binding protein | KARP_01333 | P49333 | Negative | 1252827 - 1253510 | 25834.2 |
| atp-binding protein | KARP_01334 | Not Available | Negative | 1253511 - 1253762 | 9792.03 |
| atp-binding protein | KARP_01335 | Q5A599 | Negative | 1253779 - 1254495 | 27196.1 |
| membrane protein | KARP_01336 | Not Available | Negative | 1254772 - 1255053 | 10399.6 |
| membrane protein | KARP_01337 | Not Available | Negative | 1255013 - 1255279 | 9873.96 |
| reverse transcriptase | KARP_01338 | B1N1A3 | Positive | 1255697 - 1256071 | 14263.6 |
| reverse transcriptase | KARP_01339 | Not Available | Positive | 1256171 - 1256332 | 6025.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
