Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replicative dna helicase | KARP_01290 | Q68WJ2 | Positive | 1214223 - 1215659 | 53406.4 |
| (p)pgpp hydrolase | KARP_01291 | O67012 | Positive | 1215894 - 1216469 | 22629.3 |
| ankyrin | KARP_01292 | Q5UQV3 | Positive | 1216504 - 1217148 | 24029.8 |
| membrane protein | KARP_01293 | Not Available | Positive | 1217195 - 1217701 | 18818.6 |
| dna methyltransferase | KARP_01294 | Q58015 | Negative | 1217705 - 1218514 | 31736.9 |
| atp-binding protein | KARP_01295 | Not Available | Positive | 1218881 - 1219159 | 10422.7 |
| histidine kinase | KARP_01296 | Q54YZ9 | Positive | 1219224 - 1219925 | 26246.6 |
| atp-binding protein | KARP_01297 | Q5A599 | Positive | 1220055 - 1220633 | 21799.4 |
| atp-binding protein | KARP_01298 | P0AEC7 | Positive | 1220650 - 1221498 | 32826.9 |
| atp-binding protein | KARP_01299 | P0AEC7 | Positive | 1221605 - 1222099 | 18418.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
