Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna(gln) amidotransferase subunit a | KARP_01280 | B3CQQ9 | Negative | 1199897 - 1201375 | 53499.4 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | KARP_01281 | B3CQR0 | Negative | 1201375 - 1201674 | 11526.0 |
| rnase j family beta-casp ribonuclease | KARP_01282 | M4MR97 | Negative | 1201757 - 1203493 | 64355.1 |
| dna-binding response regulator | KARP_01283 | B2S753 | Negative | 1203625 - 1204362 | 27620.5 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1205182 - 1206682 | Not Available |
| uncharacterised protein | KARP_01285 | Not Available | Positive | 1207333 - 1207497 | 6382.98 |
| uncharacterised protein | KARP_01286 | Not Available | Positive | 1207494 - 1207688 | 7893.06 |
| conjugal transfer protein | KARP_01287 | Not Available | Positive | 1208410 - 1208682 | 10496.2 |
| type i methionyl aminopeptidase | KARP_01288 | P0AE20 | Positive | 1210877 - 1211683 | 29783.0 |
| uncharacterised protein | KARP_01289 | Not Available | Positive | 1212499 - 1214214 | 66891.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
