Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad kinase | KARP_01250 | Q9ZDA2 | Negative | 1167097 - 1167888 | 29283.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | KARP_01251 | B3CRT6 | Negative | 1167905 - 1168939 | 37234.3 |
| card family transcriptional regulator | KARP_01252 | P9WJG2 | Negative | 1168963 - 1169472 | 19448.3 |
| dna polymerase iii subunit epsilon | KARP_01253 | Q92GL1 | Negative | 1169692 - 1170360 | 25737.2 |
| sodium:proline symporter | KARP_01254 | Q45614 | Positive | 1171105 - 1174542 | 128567.0 |
| uncharacterised protein | KARP_01255 | Not Available | Positive | 1175255 - 1175578 | 11835.3 |
| conjugal transfer protein trae | KARP_01256 | Not Available | Positive | 1175578 - 1175895 | 12098.3 |
| conjugal transfer protein | KARP_01257 | Not Available | Positive | 1175925 - 1176107 | 7002.42 |
| pyruvate, phosphate dikinase | KARP_01258 | Q92HI8 | Positive | 1176927 - 1179632 | 100499.0 |
| membrane protein | KARP_01259 | P54163 | Negative | 1180129 - 1180803 | 25722.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
