Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_01240 | Not Available | Positive | 1154409 - 1155269 | 32515.5 |
| conjugal transfer protein trae | KARP_01241 | Not Available | Negative | 1156080 - 1156292 | 8099.13 |
| elongation factor 4 | KARP_01242 | B3CRQ1 | Negative | 1156861 - 1158666 | 66962.4 |
| peptide chain release factor 1 | KARP_01243 | Q1RIY5 | Positive | 1159059 - 1159922 | 32850.9 |
| uncharacterised protein | KARP_01244 | Not Available | Negative | 1160242 - 1162731 | 96077.0 |
| uncharacterised protein | KARP_01245 | Not Available | Positive | 1163058 - 1163210 | 5718.34 |
| porphobilinogen synthase | KARP_01246 | P45622 | Negative | 1163436 - 1164455 | 37451.3 |
| protein tolq | KARP_01247 | P43768 | Positive | 1164626 - 1165315 | 25543.2 |
| protein tolr | KARP_01248 | Q9RMT1 | Positive | 1165321 - 1165779 | 16852.8 |
| uncharacterised protein | KARP_01249 | Not Available | Positive | 1165766 - 1167004 | 45562.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
