Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_01186 | Not Available | Negative | 1112233 - 1112406 | 6752.15 |
| molecular chaperone groel | KARP_01187 | P16625 | Negative | 1112750 - 1114417 | 59732.5 |
| chaperonin | KARP_01188 | P16626 | Negative | 1114490 - 1114774 | 10532.8 |
| ankyrin repeat-containing protein 09 | KARP_01189 | O90760 | Positive | 1115706 - 1116875 | 44620.8 |
| replicative dna helicase | KARP_01190 | Q92HG8 | Negative | 1117361 - 1118815 | 53752.5 |
| two-component sensor histidine kinase | KARP_01191 | P37894 | Negative | 1119566 - 1121128 | 59690.7 |
| ribosomal subunit interface protein | KARP_01192 | Not Available | Positive | 1121412 - 1121762 | 13464.3 |
| conjugal transfer protein trai | KARP_01193 | Not Available | Negative | 1122379 - 1122684 | 10878.1 |
| ankyrin repeat-containing protein | KARP_01194 | Q9J503 | Positive | 1122901 - 1124556 | 63058.2 |
| conjugal transfer protein traa | KARP_01195 | Not Available | Negative | 1124585 - 1124923 | 12527.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
