Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine--trna ligase | KARP_01166 | Q9ZCP0 | Positive | 1089797 - 1091332 | 58239.1 |
| dna-binding protein | KARP_01167 | P57436 | Positive | 1091375 - 1092133 | 28247.1 |
| uncharacterised protein | KARP_01168 | Not Available | Positive | 1092757 - 1092990 | 9048.5 |
| mechanosensitive ion channel protein mscs | KARP_01169 | P77338 | Negative | 1093465 - 1094331 | 32217.8 |
| septal ring lytic transglycosylase rlpa family lipoprotein | KARP_01170 | Q4ULW1 | Positive | 1095378 - 1096043 | 25319.3 |
| repeat-containing protein d | KARP_01171 | Not Available | Negative | 1096855 - 1098162 | 49891.9 |
| uncharacterised protein | KARP_01172 | Not Available | Positive | 1098654 - 1098911 | 10352.4 |
| (p)pgpp hydrolase | KARP_01173 | O67012 | Negative | 1098998 - 1099573 | 22721.6 |
| replicative dna helicase | KARP_01174 | Q92HG8 | Negative | 1099806 - 1101242 | 53401.2 |
| uncharacterised protein | KARP_01175 | Not Available | Negative | 1101251 - 1101997 | 28598.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
