Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate--trna ligase 2 | KARP_01156 | B3CRX8 | Negative | 1067519 - 1068865 | 51462.1 |
| dna mismatch repair protein mutl | KARP_01157 | A8GQA9 | Negative | 1069046 - 1071088 | 76361.6 |
| mfs transporter | KARP_01158 | Q9KWK6 | Negative | 1071116 - 1072369 | 45995.7 |
| type vi secretion protein | KARP_01159 | Q1RH21 | Negative | 1072406 - 1074970 | 95559.3 |
| type vi secretion protein | KARP_01160 | Q9ZE42 | Negative | 1074963 - 1078235 | 122133.0 |
| type vi secretion protein | KARP_01161 | Q1RH19 | Negative | 1078289 - 1082170 | 146615.0 |
| type vi secretion protein | KARP_01162 | Q92JC5 | Negative | 1082192 - 1084639 | 89592.2 |
| virb4 family type iv secretion/conjugal transfer atpase | KARP_01163 | Q9R2W4 | Negative | 1084639 - 1087056 | 90647.1 |
| type vi secretion protein | KARP_01164 | Not Available | Negative | 1087067 - 1087354 | 10782.6 |
| primosomal protein n' | KARP_01165 | Q1RI08 | Negative | 1087670 - 1089610 | 73624.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
