Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase d family protein | KARP_01146 | Q68VT0 | Positive | 1059873 - 1060463 | 21408.9 |
| is110 family transposase | KARP_01147 | P20665 | Positive | 1060951 - 1061163 | 8039.74 |
| transposase | KARP_01148 | Not Available | Positive | 1061672 - 1061872 | 7303.04 |
| is5 family transposase isot6 | KARP_01149 | Q00462 | Negative | 1062066 - 1062194 | 5165.49 |
| is5 family transposase isot6 | KARP_01150 | Not Available | Negative | 1062198 - 1062383 | 7245.07 |
| transposase | KARP_01151 | Not Available | Negative | 1062395 - 1062559 | 6407.6 |
| is5 family transposase isot6 | KARP_01152 | Q00462 | Negative | 1062650 - 1062811 | 6265.65 |
| dna helicase ii | KARP_01153 | Q1RIP8 | Positive | 1063060 - 1065201 | 81826.0 |
| transposase | KARP_01154 | Not Available | Positive | 1065402 - 1065719 | 12170.5 |
| cysteine--trna ligase | KARP_01155 | B3CRX9 | Negative | 1066018 - 1067454 | 54303.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
