Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system protein traw | KARP_01136 | P18472 | Negative | 1052584 - 1053243 | 24422.0 |
| conjugal transfer protein trac | KARP_01137 | P18004 | Negative | 1053240 - 1055732 | 92840.5 |
| uncharacterised protein | KARP_01138 | Not Available | Negative | 1055713 - 1056042 | 12588.8 |
| conjugal transfer protein | KARP_01139 | P41067 | Negative | 1056042 - 1056437 | 14425.2 |
| uncharacterised protein | KARP_01140 | Not Available | Negative | 1056452 - 1056940 | 18562.5 |
| conjugative transfer protein | KARP_01141 | Not Available | Negative | 1056937 - 1057488 | 21110.9 |
| uncharacterised protein | KARP_01142 | Not Available | Negative | 1057488 - 1057811 | 11807.3 |
| integrase | KARP_01143 | Q8TZV9 | Negative | 1057876 - 1058532 | 24786.8 |
| integrase | KARP_01144 | P76542 | Negative | 1058848 - 1059216 | 14338.8 |
| atp-binding protein | KARP_01145 | Not Available | Negative | 1059649 - 1059777 | 4821.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
