Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein | KARP_01126 | Not Available | Negative | 1046764 - 1046997 | 8698.72 |
| conjugal transfer protein | KARP_01127 | Not Available | Negative | 1046949 - 1047512 | 21512.4 |
| uncharacterised protein | KARP_01128 | A0A0H3CCP8 | Negative | 1047487 - 1048053 | 21960.2 |
| tpr repeat-containing protein 03 | KARP_01129 | Not Available | Negative | 1048164 - 1048613 | 17238.0 |
| tpr repeat-containing protein 03 | KARP_01130 | Not Available | Negative | 1048614 - 1048997 | 14633.0 |
| conjugal transfer protein tran | KARP_01131 | Not Available | Negative | 1049248 - 1049358 | 4150.98 |
| conjugal transfer protein tran | KARP_01132 | P24082 | Negative | 1049383 - 1050939 | 59362.5 |
| type-f conjugative transfer system pilin assembly protein trbc | KARP_01133 | P18473 | Negative | 1050936 - 1051319 | 14430.8 |
| conjugal transfer protein | KARP_01134 | P18471 | Negative | 1051342 - 1052286 | 34616.4 |
| uncharacterised protein | KARP_01135 | Not Available | Negative | 1052320 - 1052493 | 6582.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
