Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphotransferase | KARP_01116 | Not Available | Positive | 1036514 - 1037191 | 25619.8 |
| class ii fumarate hydratase | KARP_01117 | Q4UMT4 | Positive | 1037255 - 1038655 | 50865.6 |
| mfs transporter | KARP_01118 | Q8ZPM6 | Negative | 1038820 - 1040298 | 53839.0 |
| Trna-asp | Not Available | Not Available | Positive | 1042260 - 1042337 | Not Available |
| conjugal transfer protein trae | KARP_01120 | Not Available | Negative | 1042767 - 1042937 | 6608.84 |
| peroxiredoxin | KARP_01121 | Q9ZMU4 | Negative | 1043183 - 1043551 | 14325.5 |
| ankyrin | KARP_01122 | Q5UQV3 | Positive | 1044500 - 1045372 | 32823.1 |
| membrane protein | KARP_01123 | Not Available | Positive | 1045369 - 1046031 | 24528.9 |
| transposase | KARP_01124 | Not Available | Positive | 1046351 - 1046488 | 5288.41 |
| is5 family transposase isot6 | KARP_01125 | Q00462 | Positive | 1046478 - 1046720 | 9198.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
