Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur-binding protein | KARP_01106 | Q7N223 | Positive | 1028707 - 1029120 | 15497.0 |
| aminotransferase class v-fold plp-dependent enzyme | KARP_01107 | B8DZS1 | Positive | 1029132 - 1030418 | 47662.3 |
| cysteine desulfurase | KARP_01108 | C3PNQ8 | Positive | 1030433 - 1031704 | 47130.8 |
| iron-sulfur cluster scaffold-like protein | KARP_01109 | Q57074 | Positive | 1031744 - 1032169 | 15149.9 |
| iron-sulfur cluster assembly accessory protein | KARP_01110 | Q9ZD62 | Positive | 1032179 - 1032553 | 13664.4 |
| co-chaperone hscb | KARP_01111 | Q68XG7 | Positive | 1032566 - 1033069 | 19432.2 |
| molecular chaperone hsca | KARP_01112 | Q1RJ70 | Positive | 1033056 - 1034909 | 68023.2 |
| (2fe-2s) ferredoxin | KARP_01113 | Q1RJ69 | Positive | 1034926 - 1035270 | 12516.3 |
| is5 family transposase isot6 | KARP_01114 | Q00462 | Negative | 1035707 - 1036060 | 13746.7 |
| is5 family transposase isot6 | KARP_01115 | Q00462 | Negative | 1036087 - 1036311 | 8846.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
