Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein traa | KARP_01096 | Not Available | Negative | 1015581 - 1016084 | 19640.2 |
| conjugal transfer protein traa | KARP_01097 | Q44349 | Negative | 1016404 - 1018284 | 70955.7 |
| peptidase a8 | KARP_01098 | B3CS08 | Negative | 1019118 - 1019624 | 19834.8 |
| Trna-leu | Not Available | Not Available | Positive | 1019779 - 1019864 | Not Available |
| outer membrane protein assembly factor bamd | KARP_01100 | Q9ZDY1 | Positive | 1019919 - 1020713 | 30371.7 |
| glycosyl transferase | KARP_01101 | Q9LJP4 | Negative | 1023202 - 1024953 | 68265.2 |
| uncharacterised protein | KARP_01102 | Not Available | Negative | 1024938 - 1026248 | 50279.1 |
| cell division protein ftsa | KARP_01103 | O30994 | Negative | 1026227 - 1027474 | 46081.8 |
| Trna-ser | Not Available | Not Available | Positive | 1027649 - 1027739 | Not Available |
| alpha/beta hydrolase | KARP_01105 | Q9ZD73 | Negative | 1027768 - 1028469 | 25894.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
