Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_01076 | Not Available | Negative | 997017 - 997784 | 27694.8 |
| divalent-cation tolerance protein cuta | KARP_01077 | Q8SVR6 | Negative | 998505 - 998861 | 13614.2 |
| signal recognition particle protein | KARP_01078 | Q4UKH4 | Negative | 998919 - 1000271 | 49889.2 |
| uncharacterised protein | KARP_01079 | P25711 | Negative | 1001360 - 1001641 | 10954.3 |
| exodeoxyribonuclease vii small subunit | KARP_01080 | A8F1C1 | Positive | 1001695 - 1001934 | 9144.01 |
| uncharacterised protein | KARP_01081 | Not Available | Negative | 1002007 - 1002102 | 3609.49 |
| uncharacterised protein | KARP_01082 | Not Available | Negative | 1002582 - 1002845 | 10283.3 |
| transposase | KARP_01083 | Not Available | Negative | 1003035 - 1003790 | 29078.1 |
| replicative dna helicase dnab | KARP_01084 | Q4UL62 | Positive | 1004395 - 1004676 | 10714.6 |
| rna-binding protein | KARP_01085 | Not Available | Negative | 1004802 - 1005149 | 13425.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
