Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | KARP_01066 | Not Available | Negative | 985932 - 986210 | 10422.7 |
| dna methyltransferase | KARP_01067 | Q58015 | Positive | 986578 - 987387 | 31736.9 |
| membrane protein | KARP_01068 | Not Available | Negative | 987391 - 987894 | 18521.3 |
| ankyrin | KARP_01069 | G3I6Z6 | Negative | 987942 - 988586 | 24003.6 |
| (p)pgpp hydrolase | KARP_01070 | O67012 | Negative | 988621 - 989196 | 22630.2 |
| replicative dna helicase | KARP_01071 | Q92HG8 | Negative | 989430 - 990878 | 53663.3 |
| uncharacterised protein | KARP_01072 | Not Available | Negative | 990887 - 992602 | 67222.5 |
| is630 family transposase | KARP_01073 | Not Available | Negative | 992889 - 993083 | 7576.52 |
| cell surface protein | KARP_01074 | Q9AJ37 | Negative | 993267 - 996008 | 100456.0 |
| guanylate kinase | KARP_01075 | Q4UK55 | Negative | 996143 - 996808 | 25569.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
