Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein | KARP_01046 | P18471 | Positive | 961593 - 962570 | 35908.1 |
| type-f conjugative transfer system pilin assembly protein trbc | KARP_01047 | P18473 | Positive | 962593 - 962976 | 14430.8 |
| conjugal transfer protein tran | KARP_01048 | P24082 | Positive | 962973 - 964529 | 59421.7 |
| conjugal transfer protein tran | KARP_01049 | Not Available | Positive | 964554 - 964667 | 4220.12 |
| conjugal transfer protein | KARP_01050 | Not Available | Positive | 964679 - 965362 | 26299.8 |
| conjugal transfer protein trah | KARP_01051 | P15069 | Positive | 965359 - 966660 | 48083.5 |
| conjugal transfer protein trag | KARP_01052 | P33790 | Positive | 966660 - 969287 | 97513.3 |
| tpr repeat-containing protein 08 | KARP_01053 | Not Available | Positive | 969300 - 970439 | 43222.8 |
| conjugal transfer protein | KARP_01054 | P22708 | Positive | 970445 - 972199 | 66271.6 |
| transposase | KARP_01055 | B7NGZ6 | Negative | 972209 - 973180 | 37738.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
