Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation:proton antiporter | KARP_01016 | Not Available | Negative | 937426 - 937821 | 14560.1 |
| sodium:proton antiporter | KARP_01017 | Q6GJ46 | Negative | 937805 - 938239 | 15686.6 |
| sodium:proton antiporter | KARP_01018 | Q52978 | Negative | 938260 - 938850 | 21770.4 |
| sodium:proton antiporter | KARP_01019 | Q92IR6 | Negative | 938847 - 939176 | 12069.9 |
| Trna-glu | Not Available | Not Available | Positive | 939305 - 939379 | Not Available |
| haloacid dehalogenase | KARP_01021 | Q5HQN3 | Negative | 939728 - 940588 | 32130.8 |
| dna gyrase subunit b | KARP_01022 | Q1RHT8 | Positive | 940705 - 943128 | 90493.1 |
| uncharacterised protein | KARP_01023 | Not Available | Negative | 943165 - 943689 | 19185.5 |
| amino acid permease | KARP_01024 | O07576 | Positive | 943991 - 945406 | 50574.3 |
| Trna-val | Not Available | Not Available | Positive | 945420 - 945496 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
