Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trah | KARP_00996 | Not Available | Negative | 919101 - 919277 | 6400.46 |
| conjugal transfer protein trah | KARP_00997 | P15069 | Negative | 919327 - 919956 | 22963.6 |
| conjugal transfer protein | KARP_00998 | Not Available | Negative | 919953 - 920669 | 27371.2 |
| ankyrin repeat-containing protein 16 | KARP_00999 | Not Available | Negative | 920864 - 922183 | 50240.6 |
| conjugal transfer protein tran | KARP_01000 | P24082 | Negative | 922343 - 924034 | 64850.3 |
| type-f conjugative transfer system pilin assembly protein trbc | KARP_01001 | P18473 | Negative | 924031 - 924414 | 14428.8 |
| conjugative transfer protein | KARP_01002 | P18471 | Negative | 924437 - 924964 | 19484.7 |
| ankyrin repeat-containing protein | KARP_01003 | O90760 | Positive | 925613 - 926602 | 37377.3 |
| conjugal transfer protein trac | KARP_01004 | P18004 | Negative | 926516 - 927466 | 34336.3 |
| uncharacterised protein | KARP_01005 | Not Available | Negative | 928150 - 928287 | 5090.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
