Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transfer protein | KARP_00986 | Not Available | Negative | 904549 - 905004 | 17566.6 |
| hnh endonuclease | KARP_00987 | P19593 | Negative | 905215 - 906930 | 66750.3 |
| conjugal transfer protein traa | KARP_00988 | Q44349 | Positive | 907613 - 909826 | 83797.4 |
| conjugal transfer protein trai | KARP_00989 | Not Available | Positive | 909945 - 911462 | 56465.0 |
| conjugal transfer protein trai | KARP_00990 | Not Available | Positive | 911476 - 912027 | 20145.2 |
| transposase | KARP_00991 | B7NGZ6 | Positive | 912079 - 913074 | 38576.8 |
| conjugal transfer protein | KARP_00992 | P22708 | Negative | 913084 - 914838 | 66244.7 |
| tpr repeat-containing protein 08 | KARP_00993 | Not Available | Negative | 914842 - 915987 | 43829.6 |
| conjugal transfer protein trag | KARP_00994 | P33790 | Negative | 916003 - 918654 | 98136.8 |
| conjugal transfer protein trah | KARP_00995 | Not Available | Negative | 918654 - 919088 | 16459.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
