Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | KARP_00976 | Not Available | Positive | 895214 - 895453 | 8726.61 |
| membrane protein | KARP_00977 | Not Available | Positive | 895457 - 895717 | 9518.32 |
| uncharacterised protein | KARP_00978 | Not Available | Positive | 896587 - 896763 | 6958.52 |
| uncharacterised protein | KARP_00979 | Not Available | Negative | 897007 - 898509 | 57831.7 |
| atp-binding protein | KARP_00980 | Not Available | Positive | 899405 - 900133 | 27905.7 |
| atp-binding protein | KARP_00981 | Q8D5Z6 | Positive | 900155 - 901012 | 33118.4 |
| (p)pgpp hydrolase | KARP_00982 | Q2YN11 | Positive | 901113 - 901688 | 22728.4 |
| transposase | KARP_00983 | Not Available | Positive | 901810 - 902832 | 38905.6 |
| tpr repeat-containing protein 08 | KARP_00984 | Not Available | Negative | 903023 - 904225 | 45770.2 |
| uncharacterised protein | KARP_00985 | Not Available | Negative | 904322 - 904465 | 5436.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
