Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin | KARP_00956 | Q5UQV3 | Positive | 875084 - 875728 | 24058.8 |
| membrane protein | KARP_00957 | Not Available | Positive | 875775 - 876326 | 20130.1 |
| dna methyltransferase | KARP_00958 | Q58015 | Negative | 876356 - 876964 | 23957.7 |
| uncharacterised protein | KARP_00959 | Not Available | Positive | 877670 - 877846 | 6958.52 |
| uncharacterised protein | KARP_00960 | Not Available | Negative | 878090 - 879592 | 57831.7 |
| atp-binding protein | KARP_00961 | Not Available | Positive | 880488 - 881216 | 27905.7 |
| atp-binding protein | KARP_00962 | Q8D5Z6 | Positive | 881238 - 882095 | 33148.4 |
| (p)pgpp hydrolase | KARP_00963 | Q2YN11 | Positive | 882196 - 882771 | 22728.4 |
| transposase | KARP_00964 | Not Available | Positive | 882893 - 883903 | 38605.2 |
| conjugal transfer protein trad | KARP_00965 | Not Available | Negative | 883971 - 884246 | 10731.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
