Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_00946 | Q9KDS9 | Positive | 869553 - 869801 | 9278.44 |
| acetyl-/propionyl-coenzyme a carboxylase alpha chain | KARP_00947 | Q5LUF3 | Positive | 870017 - 870337 | 12528.9 |
| uncharacterised protein | KARP_00948 | Q5LUF3 | Positive | 870379 - 870504 | 4826.11 |
| biotin carboxylase | KARP_00949 | P0DTA4 | Positive | 870558 - 871127 | 21386.8 |
| atp-binding protein | KARP_00950 | Not Available | Positive | 871189 - 871404 | 8048.82 |
| atp-binding protein | KARP_00951 | Not Available | Positive | 871563 - 871859 | 10890.2 |
| hydrolase | KARP_00952 | Not Available | Positive | 871916 - 872089 | 6697.26 |
| uncharacterised protein | KARP_00953 | Not Available | Positive | 873016 - 873963 | 36849.3 |
| uncharacterised protein | KARP_00954 | Not Available | Positive | 874017 - 874247 | 9161.15 |
| (p)pgpp hydrolase | KARP_00955 | O67012 | Positive | 874477 - 875049 | 22578.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
