Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l9 | KARP_00936 | A5CCY5 | Positive | 859656 - 860183 | 19545.8 |
| atpase aaa | KARP_00937 | Q1RGS8 | Positive | 860339 - 861814 | 55603.3 |
| uncharacterised protein | KARP_00938 | Not Available | Positive | 862976 - 863164 | 7411.86 |
| Trna-gly | Not Available | Not Available | Positive | 863886 - 863959 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 864060 - 864135 | Not Available |
| uncharacterised protein | KARP_00941 | Q92JL9 | Positive | 865016 - 866359 | 52048.8 |
| trna 2-thiouridine(34) synthase mnma | KARP_00942 | A5CFJ6 | Negative | 866593 - 867702 | 41068.4 |
| propionyl-coa carboxylase beta chain | KARP_00943 | I3R7F1 | Positive | 868106 - 868300 | 6952.55 |
| propionyl-coa carboxylase beta chain | KARP_00944 | Q2TBR0 | Positive | 868548 - 868706 | 5922.96 |
| propionyl-coa carboxylase beta chain | KARP_00945 | Q168G2 | Positive | 868842 - 869150 | 11333.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
