Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp reductase | KARP_00916 | Q68VY7 | Positive | 840725 - 841450 | 25978.9 |
| acyl carrier protein | KARP_00917 | O54439 | Positive | 841573 - 841959 | 14313.8 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | KARP_00918 | P0AAI7 | Positive | 842046 - 843317 | 45410.8 |
| 50s ribosomal protein l33 | KARP_00919 | B3CRY6 | Positive | 844412 - 844582 | 6590.24 |
| 30s ribosomal protein s16 | KARP_00920 | B3CRY7 | Positive | 844591 - 844914 | 12263.2 |
| Trna-thr | Not Available | Not Available | Positive | 845023 - 845097 | Not Available |
| dde transposase family protein | KARP_00922 | Q00462 | Positive | 847401 - 847634 | 9423.61 |
| transposase | KARP_00923 | Not Available | Positive | 847735 - 847896 | 6218.43 |
| uncharacterised protein | KARP_00924 | Not Available | Positive | 848939 - 849034 | 3352.84 |
| uncharacterised protein | KARP_00925 | Not Available | Positive | 849569 - 849679 | 4183.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
