Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s14 | KARP_00896 | B3CT18 | Negative | 830510 - 830815 | 11781.7 |
| 50s ribosomal protein l5 | KARP_00897 | A8GVC6 | Negative | 830834 - 831403 | 21879.2 |
| 50s ribosomal protein l24 | KARP_00898 | B3CT16 | Negative | 831428 - 831745 | 11432.4 |
| 50s ribosomal protein l14 | KARP_00899 | B3CT15 | Negative | 831747 - 832115 | 13297.6 |
| 30s ribosomal protein s17 | KARP_00900 | A5CCK3 | Negative | 832190 - 832429 | 9201.28 |
| 50s ribosomal protein l29 | KARP_00901 | B2V7K5 | Negative | 832430 - 832651 | 8696.63 |
| 50s ribosomal protein l16 | KARP_00902 | B3CT12 | Negative | 832644 - 833054 | 15029.8 |
| 30s ribosomal protein s3 | KARP_00903 | B3CT11 | Negative | 833083 - 833742 | 24791.5 |
| 50s ribosomal protein l22 | KARP_00904 | B3CT10 | Negative | 833758 - 834108 | 12947.4 |
| 30s ribosomal protein s19 | KARP_00905 | A5CCK8 | Negative | 834110 - 834388 | 10533.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
