Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| co2+/mg2+ efflux protein apag | KARP_00866 | Q73G26 | Positive | 801231 - 801656 | 16381.6 |
| pled family two-component system response regulator | KARP_00867 | Q9A5I5 | Negative | 802166 - 803635 | 55976.4 |
| Trna-ser | Not Available | Not Available | Positive | 803988 - 804076 | Not Available |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | KARP_00869 | Q9ZD09 | Positive | 804105 - 804668 | 20549.1 |
| magnesium transporter | KARP_00870 | Q1RGX2 | Negative | 804718 - 805632 | 35132.2 |
| rrna maturation rnase ybey | KARP_00871 | O05960 | Negative | 805645 - 806148 | 19448.5 |
| transposase | KARP_00872 | Not Available | Positive | 807653 - 808189 | 20328.1 |
| signal recognition particle-docking protein ftsy | KARP_00873 | Q68VX4 | Negative | 809642 - 810583 | 34524.6 |
| uncharacterised protein | KARP_00874 | Q9ZDV2 | Positive | 810695 - 811084 | 15105.5 |
| p-type conjugative transfer protein virb9 | KARP_00875 | Q6FYW2 | Negative | 811347 - 812111 | 29785.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
