Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_00846 | Not Available | Positive | 788068 - 788280 | 8148.54 |
| atp/adp translocase | KARP_00847 | Q1RIG3 | Positive | 788855 - 790255 | 53081.4 |
| atpase aaa | KARP_00848 | Q1RIL2 | Positive | 790408 - 791952 | 57997.0 |
| uncharacterised protein | KARP_00849 | Not Available | Positive | 791952 - 793757 | 70020.6 |
| octaprenyl-diphosphate synthase | KARP_00850 | P44916 | Positive | 793777 - 794793 | 38785.0 |
| type-f conjugative transfer system protein traw | KARP_00851 | Not Available | Positive | 794951 - 795106 | 6107.69 |
| type-f conjugative transfer system protein traw | KARP_00852 | Not Available | Positive | 795223 - 795387 | 6023.42 |
| conjugal transfer protein trag | KARP_00853 | Not Available | Positive | 795881 - 796000 | 4617.54 |
| conjugal transfer protein trag | KARP_00854 | Not Available | Positive | 795988 - 796365 | 14502.8 |
| uncharacterised protein | KARP_00855 | Not Available | Positive | 796419 - 796568 | 5609.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
