Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_00836 | Q9ZDZ8 | Positive | 776026 - 777219 | 44276.5 |
| uncharacterised protein | KARP_00837 | Q9ZDL0 | Positive | 778393 - 778773 | 14673.2 |
| lipid ii flippase murj | KARP_00838 | Q9ZCW4 | Negative | 778810 - 780324 | 55938.8 |
| uncharacterised protein | KARP_00839 | Not Available | Negative | 780701 - 780850 | 5719.88 |
| type i secretion system permease/atpase | KARP_00840 | Q03024 | Positive | 781638 - 783392 | 64441.3 |
| hlyd family type i secretion periplasmic adaptor subunit | KARP_00841 | Q7ANN5 | Positive | 783430 - 784968 | 57250.9 |
| transposase | KARP_00842 | Not Available | Negative | 786264 - 786530 | 10069.1 |
| is630 family transposase | KARP_00843 | Not Available | Negative | 786671 - 786862 | 7502.89 |
| conjugative transfer protein | KARP_00844 | Not Available | Positive | 787053 - 787214 | 6192.99 |
| transposase | KARP_00845 | Not Available | Positive | 787601 - 788077 | 18080.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
