Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | KARP_00826 | Not Available | Negative | 770020 - 770127 | 3707.5 |
| dna methyltransferase | KARP_00827 | P04043 | Negative | 770350 - 771159 | 31610.8 |
| atp-binding protein | KARP_00828 | Not Available | Positive | 771533 - 772261 | 27874.7 |
| atp-binding protein | KARP_00829 | Q8D5Z6 | Positive | 772283 - 773140 | 33227.4 |
| (p)pgpp hydrolase | KARP_00830 | Q2YN11 | Positive | 773241 - 773819 | 22905.4 |
| transposase | KARP_00831 | Not Available | Positive | 773938 - 774582 | 25191.3 |
| is5 family transposase isot6 | KARP_00832 | Not Available | Negative | 774823 - 774930 | 4062.16 |
| is5 family transposase isot6 | KARP_00833 | Q00462 | Negative | 774908 - 775135 | 8776.8 |
| is5 family transposase isot6 | KARP_00834 | Q00462 | Negative | 775147 - 775584 | 17034.8 |
| uncharacterised protein | KARP_00835 | Not Available | Positive | 775714 - 775866 | 5950.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
