Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s26 family signal peptidase | KARP_00806 | A8F0M1 | Positive | 751412 - 752152 | 28703.8 |
| ribonuclease iii | KARP_00807 | A8GM79 | Positive | 752208 - 752948 | 27792.4 |
| transposase | KARP_00808 | Not Available | Negative | 753153 - 753308 | 6166.56 |
| transposase | KARP_00809 | Not Available | Negative | 753283 - 753399 | 4474.42 |
| is5 family transposase isot6 | KARP_00810 | Q00462 | Negative | 753502 - 753639 | 5353.75 |
| is5 family transposase isot6 | KARP_00811 | Not Available | Positive | 753804 - 753908 | 4043.9 |
| is5 family transposase isot6 | KARP_00812 | Q00462 | Positive | 753883 - 754293 | 16220.9 |
| dna helicase | KARP_00813 | Q9ZD08 | Positive | 754595 - 754756 | 6268.36 |
| (p)pgpp hydrolase | KARP_00814 | O67012 | Positive | 754989 - 755246 | 10304.5 |
| acyl-[acp]--phospholipid o-acyltransferase | KARP_00815 | A8AP56 | Negative | 755811 - 759284 | 129187.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
