Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trah | KARP_00786 | P15069 | Negative | 733895 - 734524 | 22963.6 |
| conjugal transfer protein | KARP_00787 | Not Available | Negative | 734521 - 735204 | 26242.8 |
| conjugal transfer protein tran | KARP_00788 | P24082 | Negative | 735216 - 736910 | 64658.9 |
| integrase | KARP_00789 | Not Available | Negative | 737050 - 737406 | 14055.0 |
| integrase | KARP_00790 | Not Available | Negative | 737423 - 737587 | 6350.02 |
| replicative dna helicase | KARP_00791 | Q4UL62 | Negative | 738358 - 738906 | 21360.6 |
| replicative dna helicase | KARP_00792 | Q1RI04 | Negative | 738967 - 739122 | 5629.86 |
| integrase | KARP_00793 | Not Available | Positive | 739960 - 740130 | 6746.41 |
| integrase | KARP_00794 | Not Available | Positive | 740475 - 740615 | 5673.09 |
| integrase | KARP_00795 | Not Available | Positive | 740591 - 740740 | 5558.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
