Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transfer protein | KARP_00776 | Not Available | Negative | 720245 - 720700 | 17379.3 |
| hnh endonuclease | KARP_00777 | P19593 | Negative | 720910 - 722625 | 66736.2 |
| conjugal transfer protein traa | KARP_00778 | Q44363 | Positive | 723307 - 724347 | 40230.4 |
| conjugal transfer protein traa | KARP_00779 | Q44363 | Positive | 724389 - 726164 | 66751.1 |
| conjugal transfer protein trai | KARP_00780 | Not Available | Positive | 726283 - 728364 | 77241.0 |
| transposase | KARP_00781 | B7NGZ6 | Positive | 728416 - 729435 | 39502.9 |
| conjugal transfer protein | KARP_00782 | P22708 | Negative | 729445 - 731199 | 66449.9 |
| uncharacterised protein | KARP_00783 | Not Available | Negative | 731205 - 731339 | 5141.41 |
| conjugal transfer protein trag | KARP_00784 | P33790 | Negative | 731326 - 733221 | 69800.3 |
| conjugal transfer protein trah | KARP_00785 | Not Available | Negative | 733221 - 733700 | 18225.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
