Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_00766 | Not Available | Positive | 711815 - 712954 | 44809.8 |
| uncharacterised protein | KARP_00767 | Not Available | Positive | 712956 - 713528 | 22266.8 |
| (p)pgpp hydrolase | KARP_00768 | O67012 | Positive | 713758 - 714330 | 22617.3 |
| ankyrin | KARP_00769 | Q8BLD6 | Positive | 714365 - 715009 | 24142.8 |
| membrane protein | KARP_00770 | Not Available | Positive | 715057 - 715560 | 18689.5 |
| dna methyltransferase | KARP_00771 | Q58015 | Negative | 715564 - 716373 | 31667.7 |
| atp-binding protein | KARP_00772 | P23545 | Positive | 716759 - 717535 | 29893.8 |
| atp-binding protein | KARP_00773 | Q8D5Z6 | Positive | 717510 - 718367 | 33179.4 |
| (p)pgpp hydrolase | KARP_00774 | Q2YN11 | Positive | 718468 - 719043 | 22682.1 |
| transposase | KARP_00775 | Not Available | Positive | 719165 - 720175 | 38546.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
