Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | KARP_00756 | P49333 | Negative | 703734 - 704417 | 25834.2 |
| atp-binding protein | KARP_00757 | Not Available | Negative | 704418 - 704669 | 9792.03 |
| atp-binding protein | KARP_00758 | Q5A599 | Negative | 704686 - 705264 | 21785.4 |
| atp-binding protein | KARP_00759 | Not Available | Negative | 705435 - 705611 | 6585.19 |
| dna methyltransferase | KARP_00760 | Q58015 | Positive | 705978 - 706673 | 26908.1 |
| rna-binding protein | KARP_00761 | Not Available | Positive | 707043 - 707579 | 20592.6 |
| rna-binding protein | KARP_00762 | Not Available | Positive | 707557 - 707727 | 6537.2 |
| replicative dna helicase | KARP_00763 | Q1RI04 | Negative | 707717 - 709048 | 49213.2 |
| uncharacterised protein | KARP_00764 | Not Available | Negative | 709057 - 710772 | 67081.5 |
| conjugal transfer protein tran | KARP_00765 | Not Available | Negative | 711000 - 711254 | 9258.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
