Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trad | KARP_00726 | Not Available | Negative | 683735 - 684064 | 12865.9 |
| conjugal transfer protein trah | KARP_00727 | Not Available | Negative | 684045 - 684443 | 14840.4 |
| conjugal transfer protein trah | KARP_00728 | P15069 | Negative | 684493 - 685122 | 23009.7 |
| transposase | KARP_00729 | Not Available | Negative | 685263 - 686138 | 34134.0 |
| conjugal transfer protein | KARP_00730 | Not Available | Negative | 686229 - 686774 | 21165.7 |
| uncharacterised protein | KARP_00731 | Not Available | Negative | 686858 - 687259 | 15381.4 |
| uncharacterised protein | KARP_00732 | Not Available | Negative | 687353 - 688516 | 44718.9 |
| conjugal transfer protein tran | KARP_00733 | P24082 | Negative | 688652 - 688852 | 7470.22 |
| integrase | KARP_00734 | P39347 | Positive | 689364 - 690206 | 33632.3 |
| conjugative transfer protein | KARP_00735 | Not Available | Negative | 690375 - 690626 | 9830.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
