Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag | KARP_00696 | P33790 | Positive | 649775 - 650401 | 23262.7 |
| sodium:proline symporter | KARP_00697 | Q45614 | Negative | 651557 - 654994 | 128753.0 |
| Trna-met | Not Available | Not Available | Positive | 655926 - 656002 | Not Available |
| isocitrate dehydrogenase | KARP_00699 | Q1RJU4 | Negative | 656153 - 657712 | 57875.1 |
| hydroxymethylbilane synthase | KARP_00700 | B3CUP9 | Positive | 657885 - 658781 | 33104.7 |
| proline/betaine transporter | KARP_00701 | Q9KWK6 | Positive | 659093 - 660313 | 45510.5 |
| rna-binding protein | KARP_00702 | Not Available | Positive | 661384 - 663051 | 64074.1 |
| uncharacterised protein | KARP_00703 | Q9ZE16 | Positive | 663605 - 665473 | 71093.1 |
| threonine dehydratase | KARP_00704 | Q54HH2 | Negative | 666039 - 667052 | 37516.5 |
| endopeptidase la | KARP_00705 | B3CUN9 | Positive | 667169 - 669541 | 88145.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
