Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system protein traw | KARP_00686 | P18472 | Positive | 643518 - 644177 | 24418.9 |
| uncharacterised protein | KARP_00687 | Not Available | Positive | 644261 - 644464 | 7865.65 |
| conjugal transfer protein | KARP_00688 | P18471 | Positive | 644465 - 645442 | 35848.1 |
| type-f conjugative transfer system pilin assembly protein trbc | KARP_00689 | Not Available | Positive | 645465 - 645596 | 5087.46 |
| tpr repeat-containing protein 03 | KARP_00690 | Not Available | Positive | 645856 - 647082 | 47644.1 |
| uncharacterised protein | KARP_00691 | Not Available | Positive | 647186 - 647632 | 17007.3 |
| uncharacterised protein | KARP_00692 | Not Available | Positive | 647595 - 647747 | 6056.34 |
| conjugal transfer protein | KARP_00693 | Not Available | Positive | 647759 - 648475 | 27695.7 |
| conjugal transfer protein trah | KARP_00694 | P15069 | Positive | 648472 - 649101 | 22869.4 |
| conjugal transfer protein trah | KARP_00695 | Not Available | Positive | 649290 - 649775 | 18472.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
