Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh ubiquinone oxidoreductase | KARP_00656 | Q9ZCK4 | Negative | 617877 - 618239 | 14439.3 |
| ribonuclease h | KARP_00657 | A5CEP5 | Negative | 618211 - 618717 | 19222.9 |
| uncharacterised protein | KARP_00658 | Not Available | Negative | 618717 - 619244 | 20588.0 |
| thiol:disulfide interchange protein | KARP_00659 | Not Available | Negative | 619373 - 620197 | 30885.1 |
| ferredoxin | KARP_00660 | Q9ZCC8 | Negative | 620327 - 620647 | 12111.7 |
| heme exporter protein c | KARP_00661 | P30962 | Negative | 620652 - 621362 | 26737.2 |
| laccase domain protein yfih | KARP_00662 | Q92HU9 | Negative | 621355 - 621969 | 23178.0 |
| glutamine synthetase | KARP_00663 | P36687 | Positive | 622064 - 622915 | 32902.7 |
| transposase | KARP_00664 | Not Available | Negative | 623419 - 623901 | 18327.8 |
| conjugal transfer protein | KARP_00665 | P18471 | Negative | 624443 - 624799 | 13085.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
