Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron permease | KARP_00636 | Q1C8M3 | Negative | 603632 - 604471 | 30517.7 |
| uncharacterised protein | KARP_00637 | Q9ZDD7 | Negative | 604500 - 604865 | 13836.7 |
| Trna-lys | Not Available | Not Available | Positive | 605231 - 605306 | Not Available |
| eal domain-containing protein | KARP_00639 | Q8EJM6 | Negative | 605330 - 606562 | 47019.6 |
| abc transporter atp-binding protein | KARP_00640 | P54537 | Negative | 606748 - 607479 | 27321.8 |
| arginine abc transporter permease | KARP_00641 | Q4UKC4 | Negative | 607472 - 608089 | 22927.0 |
| dde transposase family protein | KARP_00642 | Q00462 | Positive | 608758 - 608949 | 7634.37 |
| transposase | KARP_00643 | Not Available | Positive | 608957 - 609220 | 9880.28 |
| uncharacterised protein | KARP_00644 | Not Available | Positive | 609749 - 611002 | 46284.0 |
| dde transposase family protein | KARP_00645 | Q00462 | Positive | 611175 - 611417 | 9503.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
