Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l10 | KARP_00626 | A5CC95 | Negative | 597323 - 597832 | 18830.3 |
| 50s ribosomal protein l1 | KARP_00627 | A5CC96 | Negative | 597836 - 598582 | 26709.6 |
| 50s ribosomal protein l11 | KARP_00628 | A7HWQ0 | Negative | 598586 - 599032 | 15846.5 |
| transcription termination/antitermination factor nusg | KARP_00629 | Q92J91 | Negative | 599072 - 599608 | 20527.2 |
| preprotein translocase subunit sece | KARP_00630 | Q8KTA9 | Negative | 599650 - 599850 | 7613.9 |
| Trna-trp | Not Available | Not Available | Positive | 599912 - 599986 | Not Available |
| elongation factor tu | KARP_00632 | A5CCA0 | Negative | 600105 - 601289 | 42888.0 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | KARP_00633 | Q9LLY4 | Negative | 601463 - 602227 | 29286.3 |
| recombination protein recr | KARP_00634 | A5CCA2 | Negative | 602392 - 603003 | 22817.7 |
| septation protein a | KARP_00635 | Q9ZDD9 | Negative | 603092 - 603628 | 20557.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
