Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase isot6 | KARP_00596 | Q00462 | Negative | 561879 - 562262 | 15186.5 |
| is5 family transposase isot6 | KARP_00597 | Q00462 | Negative | 562887 - 563024 | 5513.85 |
| conjugal transfer protein trac | KARP_00598 | Not Available | Negative | 563151 - 563495 | 12999.0 |
| uncharacterised protein | KARP_00599 | Not Available | Negative | 563747 - 563920 | 6610.12 |
| tyrosine--trna ligase | KARP_00600 | B3CV32 | Positive | 564510 - 565751 | 47263.3 |
| replicative dna helicase | KARP_00601 | Not Available | Positive | 566411 - 566581 | 6866.49 |
| uncharacterised protein | KARP_00602 | Q9ZDT5 | Positive | 566996 - 567337 | 12440.5 |
| transposase | KARP_00603 | Not Available | Positive | 568075 - 568179 | 3966.84 |
| is5 family transposase isot6 | KARP_00604 | Q00462 | Positive | 568191 - 568427 | 9070.14 |
| secreted effector protein pipb2 | KARP_00605 | Not Available | Negative | 568837 - 572463 | 135871.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
