Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Q00462 | Positive | 211839 - 212297 | 17841.0 |
| hypothetical protein | - | Not Available | Negative | 212983 - 213171 | 7300.72 |
| hypothetical protein | - | Q9ZCD1 | Negative | 214231 - 214554 | 12447.3 |
| hypothetical protein | - | Q5LWK3 | Negative | 214796 - 215272 | 18644.5 |
| hypothetical protein | - | A5CF21 | Positive | 215518 - 215889 | 13691.8 |
| hypothetical protein | - | A5CF22 | Positive | 215914 - 216435 | 19610.6 |
| hypothetical protein | - | B3CTE7 | Positive | 216439 - 218559 | 78194.0 |
| hypothetical protein | - | Q92HM4 | Positive | 218766 - 220289 | 56449.8 |
| hypothetical protein | - | Not Available | Positive | 221574 - 221735 | 6346.52 |
| hypothetical protein | - | Q00462 | Positive | 221689 - 221817 | 4880.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
