Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | KARP_00536 | B7NGZ6 | Positive | 497146 - 498261 | 42582.4 |
| conjugal transfer protein | KARP_00537 | P22708 | Negative | 498271 - 500025 | 66410.0 |
| tpr repeat-containing protein 08 | KARP_00538 | Not Available | Negative | 500031 - 501176 | 43575.2 |
| conjugal transfer protein trag | KARP_00539 | P33790 | Negative | 501199 - 503838 | 97656.4 |
| conjugal transfer protein trah | KARP_00540 | Not Available | Negative | 503838 - 504293 | 17458.8 |
| conjugal transfer protein trah | KARP_00541 | P15069 | Negative | 504247 - 505140 | 32653.0 |
| conjugal transfer protein | KARP_00542 | Not Available | Negative | 505322 - 505855 | 20670.3 |
| ankyrin repeat-containing protein 16 | KARP_00543 | Not Available | Negative | 506040 - 507368 | 50437.7 |
| conjugal transfer protein tran | KARP_00544 | P24082 | Negative | 507528 - 509222 | 64776.1 |
| type-f conjugative transfer system pilin assembly protein trbc | KARP_00545 | P18473 | Negative | 509219 - 509602 | 14430.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
