Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | KARP_00526 | O67012 | Positive | 484563 - 485150 | 22819.2 |
| transposase | KARP_00527 | Not Available | Positive | 485272 - 486282 | 38509.0 |
| conjugative transfer protein | KARP_00528 | Not Available | Negative | 486390 - 486602 | 8383.85 |
| tpr repeat-containing protein 08 | KARP_00529 | Not Available | Negative | 486883 - 487956 | 41021.7 |
| conjugative transfer protein | KARP_00530 | Not Available | Negative | 488278 - 488733 | 17562.6 |
| hnh endonuclease | KARP_00531 | P24200 | Negative | 488943 - 489320 | 14769.0 |
| reverse transcriptase | KARP_00532 | P19593 | Negative | 489423 - 490658 | 47581.0 |
| conjugal transfer protein traa | KARP_00533 | Q44363 | Positive | 491341 - 494160 | 106945.0 |
| conjugal transfer protein trai | KARP_00534 | Q44363 | Positive | 494424 - 496529 | 78439.4 |
| conjugal transfer protein trai | KARP_00535 | Not Available | Positive | 496543 - 497094 | 20173.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
