Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replicative dna helicase | KARP_00516 | Q68WJ2 | Positive | 476632 - 478080 | 53773.5 |
| (p)pgpp hydrolase | KARP_00517 | O67012 | Positive | 478315 - 478890 | 22629.3 |
| ankyrin | KARP_00518 | Q8BLD6 | Positive | 478925 - 479569 | 24142.8 |
| membrane protein | KARP_00519 | Not Available | Positive | 479617 - 480120 | 18689.5 |
| dna methyltransferase | KARP_00520 | Q58015 | Negative | 480124 - 480933 | 31667.7 |
| atp-binding protein | KARP_00521 | Not Available | Positive | 481307 - 481585 | 10422.7 |
| histidine kinase | KARP_00522 | Q54YZ9 | Positive | 481650 - 482351 | 26246.6 |
| atp-binding protein | KARP_00523 | Q5A599 | Positive | 482481 - 483059 | 21767.4 |
| atp-binding protein | KARP_00524 | Q54YH4 | Positive | 483210 - 483923 | 27610.5 |
| atp-binding protein | KARP_00525 | P0AEC7 | Positive | 484027 - 484521 | 18459.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
