Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (p)pgpp hydrolase | KARP_00496 | O67012 | Negative | 452112 - 452687 | 22630.2 |
| replicative dna helicase | KARP_00497 | Q92HG8 | Negative | 452921 - 454369 | 53722.3 |
| uncharacterised protein | KARP_00498 | Not Available | Negative | 454378 - 456093 | 66930.3 |
| is630 family transposase | KARP_00499 | Not Available | Negative | 456249 - 456575 | 12818.7 |
| is5 family transposase isot6 | KARP_00500 | Not Available | Positive | 456847 - 456942 | 3445.39 |
| transposase | KARP_00501 | Not Available | Positive | 456952 - 457098 | 5659.78 |
| 3'-5' exonuclease | KARP_00502 | A9H9B7 | Negative | 457304 - 457936 | 24415.4 |
| cell division protein ftsb | KARP_00503 | Q9ZDA9 | Negative | 457943 - 458242 | 11499.1 |
| phosphatidate cytidylyltransferase | KARP_00504 | Q68WV5 | Negative | 458250 - 458900 | 24278.0 |
| udp pyrophosphate synthase | KARP_00505 | Q7PBU9 | Negative | 458903 - 459598 | 27207.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
